Geno Sugar!

Attention

While this can be used as a standalone module, this module has been designed to be a building block of LIMIX2. LIMIX2 is a python module that makes available a large set of tools for genetic studies, including statistical methods for GWAS, interaction testing and variance component estimation.

Table of contents

• Install
• Quick Start in Python
  • Plink file example
  • Bgen file example
• Public Interface
  • Utils
  • Geno Queue
  • Preprocess

Comments and bugs

You can get the source and open issues on Github.